Difference between revisions of "CapC"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[capB]]-[[capC]]-[[capA]]'' | + | * '''Operon:''' ''[[capB]]-[[capC]]-[[capA]]-[[ywtC]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/11751809 PubMed] |
| − | * '''Sigma factor:''' | + | * '''Sigma factor:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19420703 PubMed] |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | * '''Regulatory mechanism:''' activated by [[DegU]]-P | + | * '''Regulatory mechanism:''' activated by [[DegU]]-P [http://www.ncbi.nlm.nih.gov/sites/entrez/19420703 PubMed] |
* '''Additional information:''' The operon is not expressed in the lab strain 168 due to lack of expression of [[DegQ]] resulting in inactivity of [[DegS]] and [[DegU]] | * '''Additional information:''' The operon is not expressed in the lab strain 168 due to lack of expression of [[DegQ]] resulting in inactivity of [[DegS]] and [[DegU]] | ||
Revision as of 10:30, 21 May 2009
- Description: capsular polyglutamate biosynthesis
| Gene name | capC |
| Synonyms | ywtA, pgsB |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 16 kDa, 9.672 |
| Gene length, protein length | 447 bp, 149 aa |
| Immediate neighbours | capA, capB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
no synthesis of the poly-gamma-glutamate capsule PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry: P96737
- KEGG entry: BSU35890
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information: The operon is not expressed in the lab strain 168 due to lack of expression of DegQ resulting in inactivity of DegS and DegU
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
