Difference between revisions of "PhoD"
| Line 82: | Line 82: | ||
* '''Modification:''' | * '''Modification:''' | ||
| − | * '''[[Cofactors]]:''' | + | * '''[[Cofactors]]:''' |
| + | ** one Fe and two Ca {{PubMed|25217636}} | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| Line 94: | Line 95: | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU02620&redirect=T BSU02620] | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU02620&redirect=T BSU02620] | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=2YEQ 2YEQ] | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=2YEQ 2YEQ] {{PubMed|25217636}} |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P42251 P42251] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P42251 P42251] | ||
Revision as of 08:21, 19 September 2014
- Description: phosphodiesterase/alkaline phosphatase
| Gene name | phoD |
| Synonyms | ycbS |
| Essential | no |
| Product | phosphodiesterase/alkaline phosphatase |
| Function | aquisition of phosphate upon phosphoate starvation |
| Gene expression levels in SubtiExpress: phoD | |
| Interactions involving this protein in SubtInteract: PhoD | |
| Metabolic function and regulation of this protein in SubtiPathways: PhoD | |
| MW, pI | 62 kDa, 8.394 |
| Gene length, protein length | 1668 bp, 556 aa |
| Immediate neighbours | yczK, tatAD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02620
Phenotypes of a mutant
Database entries
- BsubCyc: BSU02620
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: A phosphate monoester + H2O = an alcohol + phosphate (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization: extracellular (signal peptide) PubMed, secreted by the TatAD-TatCD complex PubMed
Database entries
- BsubCyc: BSU02620
- UniProt: P42251
- KEGG entry: [3]
- E.C. number: 3.1.3.1
Additional information
Expression and regulation
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Oscar Kuipers, University of Groningen, The Netherlands Homepage
Your additional remarks
References
Reviews
Original publications
