Difference between revisions of "DegQ"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[biofilm formation]]}}, | {{SubtiWiki category|[[biofilm formation]]}}, | ||
− | {{SubtiWiki category|[[transcription factors and their control]]}} | + | {{SubtiWiki category|[[transcription factors and their control]]}}, |
+ | {{SubtiWiki category|[[sporulation/ other]]}} | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = |
Revision as of 08:12, 22 April 2014
- Description: stimulates production of degradative enzymes and of extracellular poly-gamma-glutamate PubMed, stimulates phosphorylation of DegU by DegS PubMed, gene is not expressed in the lab strain 168 due to promoter down mutation in the -10 region (T - 10 ---> C) PubMed
Gene name | degQ |
Synonyms | sacQ |
Essential | no |
Product | pleiotropic regulator |
Function | regulation of exoenzyme synthesis |
Gene expression levels in SubtiExpress: degQ | |
Interactions involving this protein in SubtInteract: DegQ | |
MW, pI | 5 kDa, 6.536 |
Gene length, protein length | 138 bp, 46 aa |
Immediate neighbours | comQ, yuzC |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
biofilm formation, transcription factors and their control, sporulation/ other
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31720
Phenotypes of a mutant
loss of poly-gamma-glutamate production PubMed, no synthesis of nonribosomal peptides iturin A and plipastatin PubMed1 PubMed2, reduced synthesis of degradative enzymes PubMed, increased genetic competence PubMed
Database entries
- BsubCyc: BSU31720
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
- Correction of sfp, epsC, swrAA, and degQ as well as introduction of rapP from a plasmid present in NCIB3610 results in biofilm formation in B. subtilis 168 PubMed
The protein
Basic information/ Evolution
- Protein family: degQ family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU31720
- Structure:
- UniProt: Q99039
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information: the gene is not expressed in the lab strain 168 due to promoter down mutation in the -10 region (T - 10 ---> C) PubMed
Biological materials
- Mutant: QB4851 (cat), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed