Difference between revisions of "EpsC"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34350&redirect=T BSU34350]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/eps.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/eps.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34350&redirect=T BSU34350]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 14:50, 2 April 2014

  • Description: putative UDP-sugar epimerase, may be involved in extracellular polysaccharide synthesis, this gene is inactive in B. subtilis 168

Gene name epsC
Synonyms yveM
Essential no
Product unknown
Function biofilm formation
Gene expression levels in SubtiExpress: epsC
Regulation of this protein in SubtiPathways:
epsC
MW, pI 66 kDa, 8.775
Gene length, protein length 1794 bp, 598 aa
Immediate neighbours epsD, epsB
Sequences Protein DNA DNA_with_flanks
Genetic context
YveM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
EpsC expression.png















Categories containing this gene/protein

biofilm formation, membrane proteins

This gene is a member of the following regulons

AbrB regulon, EAR riboswitch, RemA regulon, SinR regulon


The gene

Basic information

  • Locus tag: BSU34350

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

  • Correction of sfp, epsC, swrAA, and degQ as well as introduction of rapP from a plasmid present in NCIB3610 results in biofilm formation in B. subtilis 168 PubMed


The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: polysaccharide synthase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Richard Losick, Harvard Univ., Cambridge, USA homepage

Your additional remarks

References

Reviews

Original publications

The EAR RNA switch

Regulation of the eps operon

Other original publications