Difference between revisions of "FadB"
| Line 60: | Line 60: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28540&redirect=T BSU28540] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/lcfA-ysiAB-etfBA.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/lcfA-ysiAB-etfBA.html] | ||
| Line 98: | Line 99: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28540&redirect=T BSU28540] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3PEA 3PEA] (from ''B. anthracis'', 49% identity, 66% similarity) | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3PEA 3PEA] (from ''B. anthracis'', 49% identity, 66% similarity) | ||
Revision as of 14:27, 2 April 2014
- Description: 3-hydroxyacyl-CoA dehydratase
| Gene name | fadB |
| Synonyms | ysiB |
| Essential | no |
| Product | 3-hydroxyacyl-CoA dehydratase |
| Function | fatty acid degradation |
| Gene expression levels in SubtiExpress: fadB | |
| Metabolic function and regulation of this protein in SubtiPathways: fadB | |
| MW, pI | 27 kDa, 4.951 |
| Gene length, protein length | 774 bp, 258 aa |
| Immediate neighbours | etfB, fadR |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of lipids, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU28540
Phenotypes of a mutant
Database entries
- BsubCyc: BSU28540
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O (according to Swiss-Prot)
- Protein family: enoyl-CoA hydratase/isomerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-230 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU28540
- Structure: 3PEA (from B. anthracis, 49% identity, 66% similarity)
- UniProt: P94549
- KEGG entry: [3]
- E.C. number: 4.2.1.17
Additional information
Expression and regulation
- Regulation:
- induced by long-chain fatty acids (FadR) PubMed
- subject to carbon catabolite repression (3.8-fold) (CcpA-HPr(Ser-P) PubMed
- Regulatory mechanism:
- FadR: transcription repression PubMed
- CcpA-HPr(Ser-P): transcription repression PubMed
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
