Difference between revisions of "YrhJ"

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(References)
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27160&redirect=T BSU27160]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yrhIJ.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yrhIJ.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU27160&redirect=T BSU27160]
  
 
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=2X7Y 2X7Y] (from Bacillus megaterium; 67% identity, 88% similarity)
 
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=2X7Y 2X7Y] (from Bacillus megaterium; 67% identity, 88% similarity)

Revision as of 14:21, 2 April 2014

Gene name yrhJ
Synonyms cypE
Essential no
Product NADPH-cytochrome P450 reductase
Function fatty acid metabolism
Gene expression levels in SubtiExpress: yrhJ
MW, pI 118 kDa, 6.017
Gene length, protein length 3162 bp, 1054 aa
Immediate neighbours rrcM, fatR
Sequences Protein DNA DNA_with_flanks
Genetic context
YrhJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrhJ expression.png
























Categories containing this gene/protein

electron transport/ other, lipid metabolism/ other, cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins

This gene is a member of the following regulons

FatR regulon, SigM regulon, SigW regulon, SigX regulon

The gene

Basic information

  • Locus tag: BSU27160

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • hydroxylates medium-chain fatty acids in subterminal positions PubMed
  • Protein family:
  • Paralogous protein(s): YetO

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2X7Y (from Bacillus megaterium; 67% identity, 88% similarity)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References