Difference between revisions of "YrkP"

From SubtiWiki
Jump to: navigation, search
Line 60: Line 60:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU26430&redirect=T BSU26430]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 97: Line 98:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU26430&redirect=T BSU26430]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 15:19, 2 April 2014

Gene name yrkP
Synonyms
Essential no
Product two-component response regulator
Function unknown
Gene expression levels in SubtiExpress: yrkP
Interactions involving this protein in SubtInteract: YrkP
MW, pI 26 kDa, 5.694
Gene length, protein length 693 bp, 231 aa
Immediate neighbours yrkQ, yrkO
Sequences Protein DNA DNA_with_flanks
Genetic context
YrkP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YrkP expression.png

























Categories containing this gene/protein

transcription factors and their control, membrane proteins, phosphoproteins

This gene is a member of the following regulons

YrkP regulon

The YrkP regulon

The gene

Basic information

  • Locus tag: BSU26430

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component response regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by YrkQ on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References