Difference between revisions of "YjbI"
| Line 55: | Line 55: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11560&redirect=T BSU11560] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11560&redirect=T BSU11560] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1UX8 1UX8] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1UX8 1UX8] | ||
Revision as of 13:25, 2 April 2014
- Description: truncated hemoglobin, NO protection
| Gene name | yjbI |
| Synonyms | |
| Essential | no |
| Product | truncated hemoglobin |
| Function | protection against NO, thiol redox homeostasis |
| Gene expression levels in SubtiExpress: yjbI | |
| MW, pI | 14 kDa, 5.173 |
| Gene length, protein length | 396 bp, 132 aa |
| Immediate neighbours | yjbH, cwlQ |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU11560
Phenotypes of a mutant
Database entries
- BsubCyc: BSU11560
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: binds sulfide with high affinity PubMed
- Protein family: protozoan/cyanobacterial globin family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information: K(D) for hydrogen sulfide = 5.0x10(6) M-1 PubMed
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU11560
- Structure: 1UX8
- UniProt: O31607
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
