Difference between revisions of "GlpD"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU09300&redirect=T BSU09300] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/glpD.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/glpD.html] | ||
| Line 95: | Line 96: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU09300&redirect=T BSU09300] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3da1 3DA1] (from ''Bacillus halodurans'', 57% identity, 72% similarity) | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3da1 3DA1] (from ''Bacillus halodurans'', 57% identity, 72% similarity) | ||
Revision as of 13:17, 2 April 2014
- Description: glycerol-3-phosphate dehydrogenase (menaquinone 7)
| Gene name | glpD |
| Synonyms | |
| Essential | no |
| Product | glycerol-3-phosphate dehydrogenase (menaquinone 7) |
| Function | glycerol utilization |
| Gene expression levels in SubtiExpress: glpD | |
| Metabolic function and regulation of this protein in SubtiPathways: glpD | |
| MW, pI | 62 kDa, 8.002 |
| Gene length, protein length | 1665 bp, 555 aa |
| Immediate neighbours | glpK, pgcA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, utilization of lipids
This gene is a member of the following regulons
AbrB regulon, CcpA regulon, GlpP regulon
The gene
Basic information
- Locus tag: BSU09300
Phenotypes of a mutant
Database entries
- BsubCyc: BSU09300
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol (according to Swiss-Prot)
- Protein family: FAD-dependent glycerol-3-phosphate dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): FAD
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU09300
- Structure: 3DA1 (from Bacillus halodurans, 57% identity, 72% similarity)
- UniProt: P18158
- KEGG entry: [3]
- E.C. number: 1.1.5.3
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: QB5347 (cat), available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
