Difference between revisions of "RtpA"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | ** [[MtrB|TRAP]]-[[RtpA]] {{PubMed|11557884}} | + | ** [[MtrB|TRAP]]<sub>11</sub>-[[RtpA]]<sub>3</sub> {{PubMed|24682818,11557884}} |
** forms trimers and dodecamers (tetramer of trimers) {{PubMed|20713740}}, only the trimeric form interacts with [[MtrB|TRAP]] {{PubMed|20713740}} | ** forms trimers and dodecamers (tetramer of trimers) {{PubMed|20713740}}, only the trimeric form interacts with [[MtrB|TRAP]] {{PubMed|20713740}} | ||
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<pubmed>16285852, 19258532,</pubmed> | <pubmed>16285852, 19258532,</pubmed> | ||
==Original Publications== | ==Original Publications== | ||
| − | <pubmed>15213402,16306262,15099736,15743934,11786553,11566976,15023340,18178730,12386162,11557884,10706627,18334255,12855807, 20713740 </pubmed> | + | <pubmed>15213402,16306262,15099736,15743934,11786553,11566976,15023340,18178730,12386162,11557884,10706627,18334255,12855807, 20713740 24682818</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:35, 2 April 2014
- Description: anti-TRAP
| Gene name | rtpA |
| Synonyms | yczA |
| Essential | no |
| Product | anti-TRAP |
| Function | regulation of tryptophan biosynthesis |
| Gene expression levels in SubtiExpress: rtpA | |
| Interactions involving this protein in SubtInteract: RtpA | |
| Metabolic function and regulation of this protein in SubtiPathways: rtpA | |
| MW, pI | 5 kDa, 4.862 |
| Gene length, protein length | 159 bp, 53 aa |
| Immediate neighbours | ycbJ, ycbK |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU02530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- UniProt: O31466
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532]
[WorldCat.org]
[DOI]
(I p)
Paul Gollnick, Paul Babitzke, Alfred Antson, Charles Yanofsky
Complexity in regulation of tryptophan biosynthesis in Bacillus subtilis.
Annu Rev Genet: 2005, 39;47-68
[PubMed:16285852]
[WorldCat.org]
[DOI]
(P p)
Original Publications
