Difference between revisions of "PdaA"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| + | ** de-N-acetylation of N-acetylglucosamine and N-acetyl-muramic acid for spore cortex peptidoglycan {{PubMed|12374835}} | ||
* '''Protein family:''' polysaccharide deacetylase family (according to Swiss-Prot) | * '''Protein family:''' polysaccharide deacetylase family (according to Swiss-Prot) | ||
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
Revision as of 18:40, 12 January 2014
- Description: N-acetylmuramic acid deacetylase, spore cortex peptidoglycan synthesis
| Gene name | pdaA |
| Synonyms | yfjS |
| Essential | no |
| Product | N-acetylmuramic acid deacetylase |
| Function | spore cortex peptidoglycan synthesis |
| Gene expression levels in SubtiExpress: pdaA | |
| MW, pI | 29 kDa, 7.318 |
| Gene length, protein length | 789 bp, 263 aa |
| Immediate neighbours | yfjT, yfjR |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
cell wall/ other, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- de-N-acetylation of N-acetylglucosamine and N-acetyl-muramic acid for spore cortex peptidoglycan PubMed
- Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure: 1W17
- UniProt: O34928
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: pdaA PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
