Difference between revisions of "SigG"
| Line 85: | Line 85: | ||
* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' | + | * '''[[Domains]]:''' |
* '''Modification:''' | * '''Modification:''' | ||
| − | * ''' | + | * '''[[Cofactors]]:''' |
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| Line 128: | Line 128: | ||
** ''[[spoIIGA]]'': expressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8288522,15687200 PubMed] | ** ''[[spoIIGA]]'': expressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8288522,15687200 PubMed] | ||
** ''[[sigG]]'': expressed during sporulation ([[SigF]], [[SigG]]) {{PubMed|1902213}} | ** ''[[sigG]]'': expressed during sporulation ([[SigF]], [[SigG]]) {{PubMed|1902213}} | ||
| + | ** the mRNA accumulates in a ''[[ymdB]]'' mutant {{PubMed|24163345}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 135: | Line 136: | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** the mRNA half-life is about 2.6 min {{PubMed|24163345}} | ||
=Biological materials = | =Biological materials = | ||
| Line 162: | Line 164: | ||
<pubmed>16497325</pubmed> | <pubmed>16497325</pubmed> | ||
==Original Publications== | ==Original Publications== | ||
| − | <pubmed>1900507,1902463,15175314,10806362,1902213,2497051,12867473,16707705,9829949,1487728,2448286,9852018,19497328,8126438,8355618, 18820020,2493633,7961403,15256570,12813085,9004507,8885263,18485064,19390092 23678950 22984259, 20817675,21935351 </pubmed> | + | <pubmed>1900507,1902463,15175314,10806362,1902213,2497051,12867473,16707705,9829949,1487728,2448286, 9852018,19497328,8126438,8355618, 24163345 18820020,2493633, 7961403,15256570,12813085,9004507, 8885263, 18485064,19390092 23678950 22984259, 20817675,21935351 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:45, 14 December 2013
- Description: RNA polymerase sporulation forespore-specific (late) sigma factor SigG
| Gene name | sigG |
| Synonyms | spoIIIG |
| Essential | no |
| Product | RNA polymerase sporulation forespore-specific (late) sigma factor SigG |
| Function | transcription of sporulation genes (late forespore) |
| Gene expression levels in SubtiExpress: sigG | |
| Interactions involving this protein in SubtInteract: SigG | |
| MW, pI | 29 kDa, 5.496 |
| Gene length, protein length | 780 bp, 260 aa |
| Immediate neighbours | sigE, ylmA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription, sigma factors and their control, sporulation proteins
This gene is a member of the following regulons
AbrB regulon, SigF regulon, SigG regulon, SinR regulon, Spo0A regulon
The SigG regulon
The gene
Basic information
- Locus tag: BSU15330
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: sigma-70 factor family (according to Swiss-Prot)
- Paralogous protein(s): SigF
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P19940
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
- the mRNA half-life is about 2.6 min PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References
Reviews
The SigG regulon
Original Publications
