Difference between revisions of "PhrG"

From SubtiWiki
Jump to: navigation, search
Line 29: Line 29:
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
|-
 
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrG_4141358_4141474_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:phrG_expression.png|500px]]
+
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=phrG_4141358_4141474_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:phrG_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU40310]]
 
|-
 
|-
 
|}
 
|}

Revision as of 15:01, 16 May 2013

Gene name phrG
Synonyms yycL
Essential no
Product phosphatase (RapG) regulator
Function control of DegU activity
Gene expression levels in SubtiExpress: phrG
Interactions involving this protein in SubtInteract: PhrG
MW, pI 4 kDa, 9.017
Gene length, protein length 114 bp, 38 aa
Immediate neighbours rapG, rocF
Sequences Protein DNA DNA_with_flanks
Genetic context
PhrG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PhrG expression.png
























Categories containing this gene/protein

transcription factors and their control, quorum sensing, short peptides

This gene is a member of the following regulons

CcpA regulon, RghR regulon, SigH regulon

The gene

Basic information

  • Locus tag: BSU40310

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: binds to RapG, this results in the inability of RapG to interact with DegU PubMed
  • Protein family: phr family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References