Difference between revisions of "YrkP"
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrkQ]]'', ''[[yrkO]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yrkQ]]'', ''[[yrkO]]'' | ||
|- | |- | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26430 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26430 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26430 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU26430 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU26430 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU26430 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yrkP_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yrkP_context.gif]] | ||
Revision as of 10:48, 14 May 2013
- Description: two-component response regulator
| Gene name | yrkP |
| Synonyms | |
| Essential | no |
| Product | two-component response regulator |
| Function | unknown |
| Gene expression levels in SubtiExpress: yrkP | |
| Interactions involving this protein in SubtInteract: YrkP | |
| MW, pI | 26 kDa, 5.694 |
| Gene length, protein length | 693 bp, 231 aa |
| Immediate neighbours | yrkQ, yrkO |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The YrkP regulon
The gene
Basic information
- Locus tag: BSU26430
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: OmpR family of two-component response regulators
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated by YrkQ on an Asp residue
- Cofactor(s):
- Effectors of protein activity: phosphorylation likely affects DNA-binding activity
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P54443
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Mitsuo Ogura, Taku Ohsawa, Teruo Tanaka
Identification of the sequences recognized by the Bacillus subtilis response regulator YrkP.
Biosci Biotechnol Biochem: 2008, 72(1);186-96
[PubMed:18175906]
[WorldCat.org]
[DOI]
(I p)
C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672]
[WorldCat.org]
[DOI]
(P p)
