Difference between revisions of "YtiA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || survival of salt stress | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of salt stress | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30700 ytiA] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YtiA YtiA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YtiA YtiA] | ||
| Line 24: | Line 24: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytiB]]'', ''[[ythA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytiB]]'', ''[[ythA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30700 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30700 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30700 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ytiA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ytiA_context.gif]] | ||
Revision as of 14:40, 13 May 2013
- Description: general stress protein, binds in the stationary phase to the ribosome, replaces RpmE under conditions of zinc limitation
| Gene name | ytiA |
| Synonyms | rpmE2, rpmEB |
| Essential | no |
| Product | accessory ribosomal protein |
| Function | survival of salt stress |
| Gene expression levels in SubtiExpress: ytiA | |
| Interactions involving this protein in SubtInteract: YtiA | |
| MW, pI | 9 kDa, 9.808 |
| Gene length, protein length | 246 bp, 82 aa |
| Immediate neighbours | ytiB, ythA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
translation, general stress proteins (controlled by SigB), phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30700
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: Type B subfamily (according to Swiss-Prot)
- Paralogous protein(s): RpmE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-70 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34967
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
