ytiB

ytiB
168

similar to carbonic anhydrase

Locus
BSU_30690
Molecular weight
20.97 kDa
Isoelectric point
6.17
Protein length
187 aaSequenceBlast
Gene length
564 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
4.2.1.1
Synonyms
ytiB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0288 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,138,321 → 3,138,884
The protein
Catalyzed reaction/ biological activity
H+ + hydrogencarbonate --> CO2 + H2O (according to UniProt)
Protein family
beta-class carbonic anhydrase family (with YvdA and YbcF, according to UniProt)
Structure
1G5C (PDB) (from Methanobacterium thermoautotrophicum, 34% identity) PubMed
O34872 (AlphaFold)
Paralogous protein(s)
YvdA
YbcF, Array
Expression and Regulation
Operons
Genes
ytiB-luxS
Description
PubMed
Sigma factors
SigB: sigma factor, PubMed, in sigB regulon
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ytiB->luxS

2025-03-04 23:06:41

Bzhu

78

75926799ff2de1c9324aa7def16e549e605f52eb

BC92809DA5580B1417FA8A9D54A26A0EA0ADDFD9

Biological materials
Mutant
MGNA-A293 (ytiB::erm), available at the NBRP B. subtilis, Japan
BKE30690 (ΔytiB::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTCGTTGTCCCTTTCT,  downstream forward: _UP4_CTTATCGTAAACGGTTATAA
BKK30690 (ΔytiB::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGTTCGTTGTCCCTTTCT,  downstream forward: _UP4_CTTATCGTAAACGGTTATAA
References
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F942C0F4618FACEF35ACA629355BAC288556E7B6

Page visits: 2578

Time of last update: 2025-03-31 17:08:54

Author of last update: Melvin.boenninger