Difference between revisions of "CatD"

From SubtiWiki
Jump to: navigation, search
Line 80: Line 80:
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' cell membrane (according to Swiss-Prot)
+
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 19:59, 16 July 2011

  • Description: essential for viability in the presence of catechol

Gene name catD
Synonyms yfiD
Essential no
Product unknown
Function viability in the presence of catechol
MW, pI 14 kDa, 10.115
Gene length, protein length 402 bp, 134 aa
Immediate neighbours yfiC, catE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfiD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

resistance against oxidative and electrophile stress, membrane proteins

This gene is a member of the following regulons

CatR regulon, YodB regulon

The gene

Basic information

  • Locus tag: BSU08230

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • strong induction by diamide and quinones (such as catechol) (YodB, CatR) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References