jag

jag
168

YidC1-associated protein, similar to cell elongation regulator, similar to RNA-binding protein KhpB (from Streptococcus pneumoniae and Clostridium difficile)

Locus
BSU_41030
Molecular weight
23.02 kDa
Isoelectric point
10.04
Protein length
208 aaSequenceBlast
Gene length
627 bpSequenceBlast
Function
unknown
Product
YidC1-associated protein
Essential
no
Synonyms
jag, khpB
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1847 (Galperin et al., 2021)

This gene is a member of the following regulons

SigA regulon

Gene
Coordinates
4,213,200  4,213,826
The protein
Domains
KH domain (aa 91-140) (according to UniProt)
R3H domain (aa 140-208) (according to UniProt)
Structure
3GKU (PDB) (from Clostridium symbiosum, 40% identity)
Q01620 (AlphaFold)
Expression and Regulation
Operons
Genes
rpmH-rnpA-yidC1-jag
Description
PubMed
Regulation
expression is reduced in motile cells as compared to non-motile cells PubMed
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rpmH→jag

2025-03-16 14:13:21

Jstuelk

133

E083541B5FC7B773C237692E19D8D077A360C15A

091CC69B9E971C4FEAD3C4AEC4A1CDFAE7D6AF75

Genes
yidC1-jag
Description
PubMed
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Additional information
An antisense RNA is predicted for 'jag' PubMed
Open in new tab

yidC1→jag

2025-04-03 13:43:58

ghost

112

76bc1afeca550418bdb4c6820a355bd03440f359

4F1FB76953A40B452D757ABD009F8008F6D2692D

Additional information
the mRNA is cleaved by RNase III PubMed
Biological materials
Mutant
MGNA-B878 (jag::erm), available at the NBRP B. subtilis, Japan
BKE41030 (jag::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CCTCACTTTTTCTTTCCTCC,  downstream forward: _UP4_TAGCATAAAACCGAAGTCCG
BKK41030 (jag::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CCTCACTTTTTCTTTCCTCC,  downstream forward: _UP4_TAGCATAAAACCGAAGTCCG
Reviews
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References
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23D33E2D7AB1CA02165070DB8238957E3C768E64

Page visits: 3724

Time of last update: 2025-04-02 21:53:15

Author of last update: Jstuelk