YwcC

• Description: transcription repressor (TetR family), controls slrA expression
  
  

Gene name	ywcC
Synonyms	ipa-33d
Essential	no
Product	transcription repressor (TetR family)
Function	control of SlrA expression
Gene expression levels in SubtiExpress: ywcC
Regulation of this protein in SubtiPathways: Biofilm
MW, pI	25 kDa, 8.466
Gene length, protein length	669 bp, 223 aa
Immediate neighbours	gtaC, slrA
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

transcription factors and their control, biofilm formation

The YwcC regulon:

• slrA

The gene

Basic information

• Locus tag: BSU38220

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: TetR family

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P39601

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:
  • ywcC-gtaC-galK-galT PubMed

• Expression browser: ywcC PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Reviews

Leslie Cuthbertson, Justin R Nodwell
The TetR family of regulators.
Microbiol Mol Biol Rev: 2013, 77(3);440-75
[PubMed:24006471] [WorldCat.org] [DOI] (I p)