YbdJ

From SubtiWiki
Revision as of 09:21, 14 May 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
Gene name ybdJ
Synonyms
Essential no
Product two-component response regulator
Function unknown
Gene expression levels in SubtiExpress: ybdJ
Interactions involving this protein in SubtInteract: YbdJ
MW, pI 26 kDa, 6.353
Gene length, protein length 669 bp, 223 aa
Immediate neighbours ybdG, ybdK
Sequences Protein DNA DNA_with_flanks
Genetic context
YbdJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YbdJ expression.png
























Categories containing this gene/protein

transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02000

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component transcription regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by YbdK on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References