RpmE

• Description: ribosomal protein
  
  

Gene name	rpmE
Synonyms
Essential	no PubMed
Product	ribosomal protein L31
Function	translation
Gene expression levels in SubtiExpress: rpmE
Interactions involving this protein in SubtInteract: RpmE
MW, pI	7 kDa, 9.157
Gene length, protein length	198 bp, 66 aa
Immediate neighbours	tdk, rho
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation

This gene is a member of the following regulons

stringent response

The gene

Basic information

• Locus tag: BSU37070

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: Type A subfamily (according to Swiss-Prot)

• Paralogous protein(s): YtiA

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity: Zn(2+) PubMed

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: Q03223

• KEGG entry: [3]

• E.C. number:

Additional information

Under conditions of zinc starvation, RpmE is replaced by its paralog YtiA, that does not require zinc PubMed

Expression and regulation

• Operon: rpmE PubMed

• Expression browser: rpmE PubMed

• Sigma factor:

• Regulation:
  • RelA dependent downregulation (Class I) during stringent response PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Additional publications: PubMed