YokL

• Description: similar to phage-related protein
  
  

Gene name	yokL
Synonyms
Essential	no
Product	unknown
Function	unknown
MW, pI	20 kDa, 4.782
Gene length, protein length	531 bp, 177 aa
Immediate neighbours	SR4, yokK
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

SP-beta prophage

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

• Locus tag: BSU21550

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: sleB family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: O31995

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: yokI-yokJ-yokK-yokL PubMed

• Expression browser: yokL PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:
  • AbrB: transcription repression PubMed

• Additional information:
  • A ncRNA is predicted between yolA and yokL PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Additional publications: PubMed

Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796] [WorldCat.org] [DOI] (I p)