YcsD

Gene name	ycsD
Synonyms
Essential	no
Product	β-hydroxyacyl-ACP dehydratase
Function	fatty acid biosynthesis
Gene expression levels in SubtiExpress: ycsD
Metabolic function and regulation of this protein in SubtiPathways: Lipid synthesis
MW, pI	14 kDa, 4.687
Gene length, protein length	390 bp, 130 aa
Immediate neighbours	yczH, ycsE
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

biosynthesis of lipids

The gene

Basic information

• Locus tag: BSU04030

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: FabZ subfamily (according to Swiss-Prot)

• Paralogous protein(s): YwpB

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P42961

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: ycsD (according to DBTBS)

• Expression browser: ycsD PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Yasutaro Fujita, Hiroshi Matsuoka, Kazutake Hirooka
Regulation of fatty acid metabolism in bacteria.
Mol Microbiol: 2007, 66(4);829-39
[PubMed:17919287] [WorldCat.org] [DOI] (P p)