Difference between revisions of "Alr"
| Line 35: | Line 35: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' BSU04640 |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 82: | Line 82: | ||
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P10725 P10725] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P10725 P10725] | ||
| − | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+ | + | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU04640] |
* '''E.C. number:''' [http://www.expasy.org/enzyme/5.1.1.1 5.1.1.1] | * '''E.C. number:''' [http://www.expasy.org/enzyme/5.1.1.1 5.1.1.1] | ||
Revision as of 09:12, 3 June 2009
- Description: alanine racemase
| Gene name | alr |
| Synonyms | dal, alrA |
| Essential | yes PubMed |
| Product | alanine racemase |
| Function | peptidoglycan biosynthesis |
| MW, pI | 43 kDa, 8.431 |
| Gene length, protein length | 1167 bp, 389 aa |
| Immediate neighbours | ydcC, ndoAI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU04640
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-alanine = D-alanine (according to Swiss-Prot)
- Protein family: alanine racemase family (according to Swiss-Prot)
- Paralogous protein(s): YncD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1L6G (with N-[5�-phosphopyridoxyl]-D-alanine, Geobacillus stearothermophilus), 1SFT (Geobacillus stearothermophilus)
- Swiss prot entry: P10725
- KEGG entry: [2]
- E.C. number: 5.1.1.1
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
