Difference between revisions of "SwrAA"

From SubtiWiki
Jump to: navigation, search
(moved SwrAA to SwrAA/1)
 
Line 1: Line 1:
−
#REDIRECT [[SwrAA/1]]
+
* '''Description:''' small RNA <br/><br/>
 +
 
 +
{| align="right" border="1" cellpadding="2"
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 +
|''surC''
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Product''' || small RNA
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 +
|-
 +
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
 +
|-
 +
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[dnaJ]]'', ''[[dnaK]]''
 +
|-
 +
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''
 +
|-
 +
|colspan="2" | '''Genetic context''' <br/> [[Image:SurC_context.jpeg]]
 +
|-
 +
|}
 +
 
 +
__TOC__
 +
 
 +
<br/><br/>
 +
 
 +
<br/><br/><br/><br/><br/>
 +
=The gene=
 +
 
 +
=== Basic information ===
 +
 
 +
* '''Locus tag:'''
 +
 
 +
===Phenotypes of a mutant ===
 +
 
 +
=== Database entries ===
 +
 
 +
* '''DBTBS entry:''' no entry
 +
 
 +
* '''SubtiList entry:''' no entry
 +
 +
* '''Structure:'''
 +
 
 +
=== Additional information===
 +
 
 +
 
 +
=Expression and regulation=
 +
 
 +
* '''Operon:''' ''surC'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
 +
 
 +
* '''Sigma factor:''' [[SigK]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
 +
 
 +
* '''Regulation:''' expressed during sporulation in the mother cell ([[SigK]], [[GerE]])[http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
 +
 
 +
* '''Regulatory mechanism:''' [[GerE]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]
 +
 
 +
* '''Additional information:'''
 +
 
 +
=Biological materials =
 +
 
 +
* '''Mutant:'''
 +
 
 +
* '''Expression vector:'''
 +
       
 +
* '''lacZ fusion:'''
 +
 
 +
 
 +
=Labs working on this gene/RNA=
 +
 
 +
 
 +
 
 +
=Your additional remarks=
 +
 
 +
=References=
 +
 
 +
# Silvaggi JM, Perkins JB, Losick R (2006) Genes for small, noncoding RNAs under sporulation control in ''Bacillus subtilis''. ''J. Bacteriol.'' '''188:''' 532-541. [http://www.ncbi.nlm.nih.gov/sites/entrez/16385044 PubMed]

Revision as of 13:11, 2 June 2009

  • Description: small RNA

Gene name surC
Synonyms
Essential no
Product small RNA
Function unknown
Gene length bp
Immediate neighbours dnaJ, dnaK
Gene sequence (+200bp)
Genetic context
SurC context.jpeg








The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation in the mother cell (SigK, GerE)PubMed
  • Regulatory mechanism: GerE: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Your additional remarks

References

  1. Silvaggi JM, Perkins JB, Losick R (2006) Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis. J. Bacteriol. 188: 532-541. PubMed
Retrieved from "http://subtiwiki.uni-goettingen.de/wiki//index.php?title=SwrAA&oldid=80364"