Difference between revisions of "Alr"
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|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed] | ||
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− | |style="background:#ABCDEF;" align="center"| '''Product''' || alanine racemase | + | |style="background:#ABCDEF;" align="center"| '''Product''' || alanine racemase |
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|style="background:#ABCDEF;" align="center"|'''Function''' || peptidoglycan biosynthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || peptidoglycan biosynthesis |
Revision as of 20:39, 8 May 2009
- Description: alanine racemase
Gene name | alr |
Synonyms | dal |
Essential | yes PubMed |
Product | alanine racemase |
Function | peptidoglycan biosynthesis |
MW, pI | 43 kDa, 8.431 |
Gene length, protein length | 1167 bp, 389 aa |
Immediate neighbours | ydcC, ndoAI |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: alanine racemase family (according to Swiss-Prot)
- Paralogous protein(s): YncD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1L6G (with N-[5�-phosphopyridoxyl]-D-alanine, Geobacillus stearothermophilus), 1SFT (Geobacillus stearothermophilus)
- Swiss prot entry: P10725
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed