Difference between revisions of "YabJ"
| Line 76: | Line 76: | ||
=== Database entries === | === Database entries === | ||
| − | * '''Structure:''' 1QD9 [http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?Dopt=s&uid=11484 NCBI] [http://www.ncbi.nlm.nih.gov/sites/entrez/10557275 PubMed] | + | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1QD9 1QD9], 1QD9 [http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?Dopt=s&uid=11484 NCBI] [http://www.ncbi.nlm.nih.gov/sites/entrez/10557275 PubMed] |
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P37552 P37552] | * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P37552 P37552] | ||
Revision as of 22:00, 5 May 2009
- Description: required for activity of PurR
| Gene name | yabJ |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | regulation of purine biosynthesis |
| MW, pI | 13 kDa, 5.134 |
| Gene length, protein length | 375 bp, 125 aa |
| Immediate neighbours | purR, spoVG |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: YjgF family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions: forms a trimer PubMed
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Swiss prot entry: P37552
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: negative autoregulation PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Weng et al. (1995) Identification of the Bacillus subtilis pur operon repressor. Proc. Natl. Acad. Sci. USA 92: 7455-7459. PubMed
- Sinha et al. (1999) Crystal structure of Bacillus subtilis YabJ, a purine regulatory protein and member of the highly conserved YjgF family.Proc. Natl. Acad. Sci. USA 96: 13074-13079. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
