Difference between revisions of "RnmV"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabE]]'', ''[[ksgA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yabE]]'', ''[[ksgA]]'' | ||
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| − | |style="background:#FAF8CC;" align="center"|'''[http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB11817]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' |
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|colspan="2" | '''Genetic context''' <br/> [[Image:rnmV_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:rnmV_context.gif]] | ||
Revision as of 05:03, 17 April 2009
- Description: RNase M5
| Gene name | rnmV |
| Synonyms | yabF |
| Essential | no |
| Product | endoribonuclease M5 |
| Function | 5S ribosomal RNA maturation |
| MW, pI | 20 kDa, 6.681 |
| Gene length, protein length | 558 bp, 186 aa |
| Immediate neighbours | yabE, ksgA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: N-terminal part: Toprim domain PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Ciaran Condon, IBPC, Paris, France Homepage
Your additional remarks
References
- Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6: 2135-2146. PubMed
- Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6(7): 2135-46. PubMed
- Condon et al. (2001) Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function. RNA 7: 242-253. PubMed
- Condon, C., Rourera, J., Brechemier-Baey, D. & Putzer, H. (2002). Ribonuclease M5 has few, if any, mRNA substrates in Bacillus subtilis. J Bacteriol 184, 2845-2849. PubMed
- Allemand et al. (2005) The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member. Nucl. Acids Res 33: 4368-4376. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
