Difference between revisions of "ThiX"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsbRB]]'', ''[[thiW]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsbRB]]'', ''[[thiW]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ykoC_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13178&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/ykoC_protein.txt Protein sequence]'''
 
 
|-
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ykoC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ykoC_context.gif]]

Revision as of 03:36, 17 April 2009

  • Description: thiamine ABC transporter

Gene name thiX
Synonyms ykoC
Essential no
Product thiamine ABC transporter
Function thiamine uptake
MW, pI 27 kDa, 10.02
Gene length, protein length 762 bp, 254 aa
Immediate neighbours rsbRB, thiW
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkoC context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane associated PubMed

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Hahne et al. (2008) From complementarity to comprehensiveness - targeting the membrane proteome of growing Bacillus subtilis by divergent approaches. Proteomics 8: 4123-4136 PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed