Difference between revisions of "Sandbox"

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Line 4: Line 4:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''tuaF''
+
|''tuaG''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yvhF ''
+
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yvhG ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of teichuronic acid
 
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of teichuronic acid
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 24 kDa, 4.553  
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 7.135  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length,  length''' || 678 bp, 226 aa  
+
|style="background:#ABCDEF;" align="center"| '''Gene length,  length''' || 756 bp, 252 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[tuaG]]'', ''[[tuaE]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[tuaH]]'', ''[[tuaF]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/tuaF_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/tuaG_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/tuaF_protein.txt Protein sequence]'''
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/tuaG_protein.txt Protein sequence]'''
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:tuaF_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:tuaG_context.gif]]
 
|-
 
|-
 
|}
 
|}
Line 43: Line 43:
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/tuaABCDEFGH.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/tuaABCDEFGH.html]
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12693]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12694]
  
 
=== Additional information===
 
=== Additional information===

Revision as of 13:07, 17 March 2009

  • Description: biosynthesis of teichuronic acid

Gene name tuaG
Synonyms yvhG
Essential no
Product unknown
Function biosynthesis of teichuronic acid
MW, pI 29 kDa, 7.135
Gene length, length 756 bp, 252 aa
Immediate neighbours tuaH, tuaF
Gene sequence (+200bp) Protein sequence
Genetic context
TuaG context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed