Difference between revisions of "RplL"

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(Extended information on the protein)
(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[rplJ]]-[[rplL]]'' {{PubMed|26101249}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplL_120607_120978_1 rplL] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplL_120607_120978_1 rplL] {{PubMed|22383849}}
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* '''Regulation:'''  
 
* '''Regulation:'''  
 
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
 
** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}}
 +
** termination/ antitermination ([[rplJ|L10]]-[[rplL|L12]]<sub>4</sub> complex) {{PubMed|26101249}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[rplJ|L10]]-[[rplL|L12]]<sub>4</sub> complex: transcription termination (attenuation) at excess of the complex (autorepression) {{PubMed|26101249}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 09:25, 23 July 2015

Gene name rplL
Synonyms
Essential yes PubMed
Product ribosomal protein L12 (BL9)
Function translation
Gene expression levels in SubtiExpress: rplL
Interactions involving this protein in SubtInteract: RplL
MW, pI 12 kDa, 4.355
Gene length, protein length 369 bp, 123 aa
Immediate neighbours rplJ, ybxB
Sequences Protein DNA DNA_with_flanks
Genetic context
RplL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplL expression.png















Categories containing this gene/protein

translation, essential genes, membrane proteins, most abundant proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01050

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • termination/ antitermination (L10-L124 complex) PubMed
  • Regulatory mechanism:
    • L10-L124 complex: transcription termination (attenuation) at excess of the complex (autorepression) PubMed
  • Additional information:
    • belongs to the 100 most abundant proteins PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 24809 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 142727 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 20697 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 11499 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 19060 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References