Difference between revisions of "YwbH"
| Line 56: | Line 56: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| − | ** ''ywbHG'' mutant is delayed in pellicle formation | + | ** ''ywbHG'' mutant is delayed in pellicle formation {{PubMed|26060272}} |
| − | ** ''ywbHG''-''yxaKC''-''ysbAB'' triple mutant is severely delayed in pellicle formation | + | ** ''ywbHG''-''yxaKC''-''ysbAB'' triple mutant is severely delayed in pellicle formation {{PubMed|26060272}} |
| − | ** ''ywbHG'' overexpression strain has more robust pellicle formation | + | ** ''ywbHG'' overexpression strain has more robust pellicle formation {{PubMed|26060272}} |
=== Database entries === | === Database entries === | ||
| Line 120: | Line 120: | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** ''ywbHG'' expression is induced by acetate | + | ** ''ywbHG'' expression is induced by acetate {{PubMed|26060272}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 145: | Line 145: | ||
=References= | =References= | ||
| − | <pubmed> 15659658 17452642</pubmed> | + | <pubmed> 26060272 15659658 17452642</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:11, 11 June 2015
- Description: putative holin
| Gene name | ywbH |
| Synonyms | ipa-23r, cidA |
| Essential | no |
| Product | putative holin |
| Function | unknown |
| Gene expression levels in SubtiExpress: ywbH | |
| MW, pI | 14 kDa, 9.591 |
| Gene length, protein length | 384 bp, 128 aa |
| Immediate neighbours | ywbI, ywbG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
membrane proteins, proteins of unknown function
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38320
Phenotypes of a mutant
Database entries
- BsubCyc: BSU38320
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: CidA subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU38320
- Structure:
- UniProt: P39591
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- ywbHG expression is induced by acetate PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yun Chen, Kevin Gozzi, Fang Yan, Yunrong Chai
Acetic Acid Acts as a Volatile Signal To Stimulate Bacterial Biofilm Formation.
mBio: 2015, 6(3);e00392
[PubMed:26060272]
[WorldCat.org]
[DOI]
(I e)
Kelly C Rice, Ethan E Mann, Jennifer L Endres, Elizabeth C Weiss, James E Cassat, Mark S Smeltzer, Kenneth W Bayles
The cidA murein hydrolase regulator contributes to DNA release and biofilm development in Staphylococcus aureus.
Proc Natl Acad Sci U S A: 2007, 104(19);8113-8
[PubMed:17452642]
[WorldCat.org]
[DOI]
(P p)
Kelly C Rice, Jeremy B Nelson, Toni G Patton, Soo-Jin Yang, Kenneth W Bayles
Acetic acid induces expression of the Staphylococcus aureus cidABC and lrgAB murein hydrolase regulator operons.
J Bacteriol: 2005, 187(3);813-21
[PubMed:15659658]
[WorldCat.org]
[DOI]
(P p)
