Difference between revisions of "YabJ"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00480&redirect=T BSU00480] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/purR-yabJ.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/purR-yabJ.html] | ||
| Line 97: | Line 98: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00480&redirect=T BSU00480] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1QD9 1QD9], 1QD9 [http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?Dopt=s&uid=11484 NCBI] [http://www.ncbi.nlm.nih.gov/sites/entrez/10557275 PubMed] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1QD9 1QD9], 1QD9 [http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?Dopt=s&uid=11484 NCBI] [http://www.ncbi.nlm.nih.gov/sites/entrez/10557275 PubMed] | ||
Revision as of 12:46, 2 April 2014
- Description: required for activity of PurR
| Gene name | yabJ |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | regulation of purine biosynthesis |
| Gene expression levels in SubtiExpress: yabJ | |
| Metabolic function and regulation of this protein in SubtiPathways: yabJ | |
| MW, pI | 13 kDa, 5.134 |
| Gene length, protein length | 375 bp, 125 aa |
| Immediate neighbours | purR, spoVG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
biosynthesis/ acquisition of nucleotides, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00480
Phenotypes of a mutant
Database entries
- BsubCyc: BSU00480
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: Ref.3 (according to Swiss-Prot) YjgF family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- forms a trimer PubMed
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU00480
- UniProt: P37552
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation: negative autoregulation PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
