Difference between revisions of "SpoVS"
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=== Database entries === | === Database entries === | ||
− | * '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=2ek0 2EK0] (from | + | * '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=2ek0 2EK0] (from ''Thermus thermophilus'', 56% identity) |
* '''UniProt:''' [http://www.uniprot.org/uniprot/P45693 P45693] | * '''UniProt:''' [http://www.uniprot.org/uniprot/P45693 P45693] |
Revision as of 16:44, 27 February 2014
- Description: required for dehydratation of the spore core and assembly of the coat, mutation increases SigD-dependent gene expression, might act via SinR
Gene name | spoVS |
Synonyms | |
Essential | no |
Product | unknown |
Function | spore coat assembly, spore core dehydratation |
Gene expression levels in SubtiExpress: spoVS | |
MW, pI | 8 kDa, 6.475 |
Gene length, protein length | 258 bp, 86 aa |
Immediate neighbours | ymdB, tdh |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16980
Phenotypes of a mutant
increased SigD-dependent gene expression, this might occur via SinR PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure: 2EK0 (from Thermus thermophilus, 56% identity)
- UniProt: P45693
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
- The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed
Biological materials
- Mutant: GP1601 (cat), available in Jörg Stülke's lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Jörg Stülke's lab
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796]
[WorldCat.org]
[DOI]
(I p)
Daniel J Rigden, Michael Y Galperin
Sequence analysis of GerM and SpoVS, uncharacterized bacterial 'sporulation' proteins with widespread phylogenetic distribution.
Bioinformatics: 2008, 24(16);1793-7
[PubMed:18562273]
[WorldCat.org]
[DOI]
(I p)
Ana R Perez, Angelica Abanes-De Mello, Kit Pogliano
Suppression of engulfment defects in bacillus subtilis by elevated expression of the motility regulon.
J Bacteriol: 2006, 188(3);1159-64
[PubMed:16428420]
[WorldCat.org]
[DOI]
(P p)
O Resnekov, A Driks, R Losick
Identification and characterization of sporulation gene spoVS from Bacillus subtilis.
J Bacteriol: 1995, 177(19);5628-35
[PubMed:7559352]
[WorldCat.org]
[DOI]
(P p)