Difference between revisions of "YsnD"

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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''  
+
* '''[[Localization]]:'''  
 
** inner spore coat, localization depends on [[SafA]]  {{PubMed|22171814,19933362}}
 
** inner spore coat, localization depends on [[SafA]]  {{PubMed|22171814,19933362}}
  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ysnD_2897788_2898123_1 ysnD] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ysnD_2897788_2898123_1 ysnD] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigE]] {{PubMed|12480901}}, [[SigK]] {{PubMed|15699190,15383836}}
+
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|12480901}}, [[SigK]] {{PubMed|15699190,15383836}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 17:19, 13 August 2013

  • Description: inner spore coat protein

Gene name ysnD
Synonyms
Essential no
Product spore coat protein
Function protection of the spore
Gene expression levels in SubtiExpress: ysnD
MW, pI 11 kDa, 8.479
Gene length, protein length 333 bp, 111 aa
Immediate neighbours ilvB, ysnE
Sequences Protein DNA DNA_with_flanks
Genetic context
YsnD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YsnD expression.png















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SigK regulon, GerE regulon


The gene

Basic information

  • Locus tag: BSU28320

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References