Difference between revisions of "MsmX"
| Line 31: | Line 31: | ||
|   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> |   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
| |- | |- | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=msmX_3984133_3985230_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:msmX_expression.png|500px]] | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=msmX_3984133_3985230_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:msmX_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU38810]] | 
| |- | |- | ||
| |} | |} | ||
Revision as of 14:56, 16 May 2013
-  Description: multiple sugar ABC transporter (ATP-binding protein) 
| Gene name | msmX | 
| Synonyms | yxkG | 
| Essential | no | 
| Product | multiple sugar ABC transporter (ATP-binding protein) | 
| Function | maltodextrin and melibiose (probably) uptake | 
| Gene expression levels in SubtiExpress: msmX | |
| Interactions involving this protein in SubtInteract: MsmX | |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 41 kDa, 7.385 | 
| Gene length, protein length | 1095 bp, 365 aa | 
| Immediate neighbours | yxkH, yxkF | 
| Sequences | Protein DNA DNA_with_flanks | 
| Genetic context    This image was kindly provided by SubtiList | |
| Expression at a glance   PubMed   | |
Contents
Categories containing this gene/protein
ABC transporters, utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38810
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94360
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Bogumiła C Marciniak, Monika Pabijaniak, Anne de Jong, Robert Dűhring, Gerald Seidel, Wolfgang Hillen, Oscar P Kuipers  
High- and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis. 
BMC Genomics: 2012, 13;401 
[PubMed:22900538]
  [WorldCat.org]
 [DOI]
 (I e)
Stefan Schönert, Sabine Seitz, Holger Krafft, Eva-Anne Feuerbaum, Iris Andernach, Gabriele Witz, Michael K Dahl  
Maltose and maltodextrin utilization by Bacillus subtilis. 
J Bacteriol: 2006, 188(11);3911-22 
[PubMed:16707683]
  [WorldCat.org]
 [DOI]
 (P p)
Juliane Ollinger, Kyung-Bok Song, Haike Antelmann, Michael Hecker, John D Helmann  
Role of the Fur regulon in iron transport in Bacillus subtilis. 
J Bacteriol: 2006, 188(10);3664-73 
[PubMed:16672620]
  [WorldCat.org]
 [DOI]
 (P p)
Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita  
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome. 
Microbiology (Reading): 2000, 146 ( Pt 3);573-579 
[PubMed:10746760]
  [WorldCat.org]
 [DOI]
 (P p)
Y Miwa, A Nakata, A Ogiwara, M Yamamoto, Y Fujita  
Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. 
Nucleic Acids Res: 2000, 28(5);1206-10 
[PubMed:10666464]
  [WorldCat.org]
 [DOI]
 (I p)
Y Quentin, G Fichant, F Denizot  
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems. 
J Mol Biol: 1999, 287(3);467-84 
[PubMed:10092453]
  [WorldCat.org]
 [DOI]
 (P p)

