Difference between revisions of "GerE"

From SubtiWiki
Jump to: navigation, search
Line 24: Line 24:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysmB]]'', ''[[ysmA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysmB]]'', ''[[ysmA]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28410 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28410 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28410 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28410 DNA_with_flanks]
 
|-
 
|-
 
|-
 
|-

Revision as of 10:56, 14 May 2013

  • Description: transcriptional regulator (repressor or activator) of a subset of sigma-K-dependent late spore coat genes

Gene name gerE
Synonyms
Essential no
Product transcriptional regulator (LuxR-FixJ family)
Function regulation of SigK-dependent gene expression
Gene expression levels in SubtiExpress: gerE
Function and regulation of this protein in SubtiPathways:
Phosphorelay, Protein secretion
MW, pI 8 kDa, 9.635
Gene length, protein length 222 bp, 74 aa
Immediate neighbours ysmB, ysmA
Sequences Protein DNA DNA_with_flanks
Genetic context
GerE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerE expression.png















Categories containing this gene/protein

transcription factors and their control, germination

This gene is a member of the following regulons

SigK regulon

The GerE regulon

The gene

Basic information

  • Locus tag: BSU28410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: LuxR-FixJ family of transcription regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References