Difference between revisions of "Fni"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ypzI]]'', ''[[ypfD]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ypzI]]'', ''[[ypfD]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22870 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22870 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ypgA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ypgA_context.gif]]

Revision as of 10:35, 14 May 2013

  • Description: isopentenyl diphosphate isomerase

Gene name fni
Synonyms ypgA
Essential no
Product isopentenyl diphosphate isomerase
Function lipid metabolism
Gene expression levels in SubtiExpress: fni
MW, pI 22 kDa, 6.101
Gene length, protein length 636 bp, 212 aa
Immediate neighbours ypzI, ypfD
Sequences Protein DNA DNA_with_flanks
Genetic context
YpgA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
Fni expression.png
























Categories containing this gene/protein

biosynthesis of lipids, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU22870

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Isopentenyl diphosphate = dimethylallyl diphosphate (according to Swiss-Prot)
  • Protein family: IPP isomerase type 2 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1P0N (complex with FMN), 1P0K
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References