Difference between revisions of "QueE"
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[queD]]'', ''[[queF]]''  | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[queD]]'', ''[[queF]]''  | ||
|-  | |-  | ||
| − | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13740   | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13740 DNA_with_flanks]  | 
|-  | |-  | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ykvL_context.gif]]  | |colspan="2" | '''Genetic context''' <br/> [[Image:ykvL_context.gif]]  | ||
Revision as of 10:03, 14 May 2013
-  Description: 7-carboxy-7-deazaguanine (CDG) synthase, required for the synthesis of the modified ribonucleotide queuosine 
 
| Gene name | queE | 
| Synonyms | ykvL | 
| Essential | no | 
| Product | 7-carboxy-7-deazaguanine (CDG) synthase | 
| Function | tRNA modification | 
| Gene expression levels in SubtiExpress: queE | |
| MW, pI | 26 kDa, 4.962 | 
| Gene length, protein length | 729 bp, 243 aa | 
| Immediate neighbours | queD, queF | 
| Sequences | Protein DNA DNA_with_flanks | 
 Genetic context  
  This image was kindly provided by SubtiList 
 | |
Expression at a glance   PubMed 
 | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13740
 
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
 
- SubtiList entry: [1]
 
Additional information
The protein
Basic information/ Evolution
- conversion of 6-carboxy-5,6,7,8-tetrahydropterin to 7-carboxy-7-deazaguanine (CDG) PubMed
 
- Catalyzed reaction/ biological activity:
 
- Protein family: radical S-adenosyl-L-methionine (SAM) superfamily
 
- Paralogous protein(s):
 
Extended information on the protein
- Kinetic information:
 
- Domains:
 
- Modification:
 
- Cofactor(s): [4Fe-4S] cluster, S-adenosyl-L-methionine, Mg(2+) PubMed
 
- Effectors of protein activity:
 
Database entries
- Structure:
 
- UniProt: O31677
 
- KEGG entry: [2]
 
- E.C. number:
 
Additional information
Expression and regulation
-  Regulation: 
- repressed in the presence of queuosine (preQ1 riboswitch) PubMed
 
 
-  Regulatory mechanism: 
- preQ1 riboswitch: transcriptional antitermination in the absence of queuosine PubMed
 
 
- Additional information:
 
Biological materials
- Mutant:
 
- Expression vector:
 
- lacZ fusion:
 
- GFP fusion:
 
- two-hybrid system:
 
- Antibody:
 
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed

