Difference between revisions of "YsnF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | |style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU28340 ysnF] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 4.229 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 4.229 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysnE]]'', ''[[trnSL-Arg2]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ysnE]]'', ''[[trnSL-Arg2]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU28340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU28340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU28340 Advanced_DNA] |
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Revision as of 13:30, 13 May 2013
- Description: general stress protein, survival of ethanol stress
| Gene name | ysnF |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | survival of ethanol stress |
| Gene expression levels in SubtiExpress: ysnF | |
| MW, pI | 32 kDa, 4.229 |
| Gene length, protein length | 858 bp, 286 aa |
| Immediate neighbours | ysnE, trnSL-Arg2 |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU28340
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated on ser/ thr/ tyr PubMed
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
'Italic text'
- UniProt: P94560
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ysnF PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Alain Lévine, Françoise Vannier, Cédric Absalon, Lauriane Kuhn, Peter Jackson, Elaine Scrivener, Valérie Labas, Joëlle Vinh, Patrick Courtney, Jérôme Garin, Simone J Séror
Analysis of the dynamic Bacillus subtilis Ser/Thr/Tyr phosphoproteome implicated in a wide variety of cellular processes.
Proteomics: 2006, 6(7);2157-73
[PubMed:16493705]
[WorldCat.org]
[DOI]
(P p)
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
A Wipat, N Carter, S C Brignell, B J Guy, K Piper, J Sanders, P T Emmerson, C R Harwood
The dnaB-pheA (256 degrees-240 degrees) region of the Bacillus subtilis chromosome containing genes responsible for stress responses, the utilization of plant cell walls and primary metabolism.
Microbiology (Reading): 1996, 142 ( Pt 11);3067-78
[PubMed:8969504]
[WorldCat.org]
[DOI]
(P p)
