Difference between revisions of "CgeC"

From SubtiWiki
Jump to: navigation, search
Line 14: Line 14:
 
|style="background:#ABCDEF;" align="center"|'''Function''' || maturation of the outermost layer of the spore
 
|style="background:#ABCDEF;" align="center"|'''Function''' || maturation of the outermost layer of the spore
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU19770 cgeC]
+
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU19770 cgeC]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 4.785   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 4.785   
Line 22: Line 22:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cgeD]]'', ''[[cgeA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cgeD]]'', ''[[cgeA]]''
 
|-
 
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13868&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU19770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU19770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU19770 Advanced_DNA]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cgeC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cgeC_context.gif]]

Revision as of 13:02, 13 May 2013

  • Description: maturation of the outermost layer of the spore

Gene name cgeC
Synonyms cgeBA
Essential no
Product unknown
Function maturation of the outermost layer of the spore
Gene expression levels in SubtiExpress: cgeC
MW, pI 11 kDa, 4.785
Gene length, protein length 303 bp, 101 aa
Immediate neighbours cgeD, cgeA
Sequences Protein DNA Advanced_DNA
Genetic context
CgeC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CgeC expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU19770

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK, GerE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References