Difference between revisions of "PpsD"
| Line 14: | Line 14: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || production of the antibacterial compound plipastatin | |style="background:#ABCDEF;" align="center"|'''Function''' || production of the antibacterial compound plipastatin | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU18310 ppsD] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 406 kDa, 5.347 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 406 kDa, 5.347 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ppsE]]'', ''[[ppsC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ppsE]]'', ''[[ppsC]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU18310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU18310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU18310 Advanced_DNA] |
|- | |- | ||
|- | |- | ||
Revision as of 12:57, 13 May 2013
- Description: plipastatin synthetase
| Gene name | ppsD |
| Synonyms | |
| Essential | no |
| Product | plipastatin synthetase |
| Function | production of the antibacterial compound plipastatin |
| Gene expression levels in SubtiExpress: ppsD | |
| MW, pI | 406 kDa, 5.347 |
| Gene length, protein length | 10809 bp, 3603 aa |
| Immediate neighbours | ppsE, ppsC |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
miscellaneous metabolic pathways, biosynthesis of antibacterial compounds
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18310
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94459
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Maria Batool, Mohammad Hassan Khalid, Muhammad Nadeem Hassan, Hafeez Fauzia Yusuf
Homology modeling of an antifungal metabolite plipastatin synthase from the Bacillus subtilis 168.
Bioinformation: 2011, 7(8);384-7
[PubMed:22347779]
[WorldCat.org]
[DOI]
(I p)
K Tsuge, T Ano, M Hirai, Y Nakamura, M Shoda
The genes degQ, pps, and lpa-8 (sfp) are responsible for conversion of Bacillus subtilis 168 to plipastatin production.
Antimicrob Agents Chemother: 1999, 43(9);2183-92
[PubMed:10471562]
[WorldCat.org]
[DOI]
(P p)
Valentina Tosato, Alessandra M Albertini, Michela Zotti, Sabrina Sonda, Carlo V Bruschi
Sequence completion, identification and definition of the fengycin operon in Bacillus subtilis 168.
Microbiology (Reading): 1997, 143 ( Pt 11);3443-3450
[PubMed:9387222]
[WorldCat.org]
[DOI]
(P p)
