Difference between revisions of "YlbI"

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|style="background:#ABCDEF;" align="center"|'''Function''' || lipopolysaccharide biosynthesis
 
|style="background:#ABCDEF;" align="center"|'''Function''' || lipopolysaccharide biosynthesis
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU15020 ylbI]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU15020 ylbI]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/CoA_synthesis.html Coenzyme A]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/CoA_synthesis.html Coenzyme A]'''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylbH]]'', ''[[ylbJ]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ylbH]]'', ''[[ylbJ]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13375&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15020 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:ylbI_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ylbI_context.gif]]

Revision as of 13:45, 13 May 2013

  • Description: pantetheine-phosphate adenylyltransferase

Gene name ylbI
Synonyms coaD
Essential no
Product pantetheine-phosphate adenylyltransferase
Function lipopolysaccharide biosynthesis
Gene expression levels in SubtiExpress: ylbI
Metabolic function and regulation of this protein in SubtiPathways:
Coenzyme A
MW, pI 18 kDa, 5.652
Gene length, protein length 483 bp, 161 aa
Immediate neighbours ylbH, ylbJ
Sequences Protein DNA Advanced_DNA
Genetic context
YlbI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YlbI expression.png















Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU15020

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + pantetheine 4'-phosphate = diphosphate + 3'-dephospho-CoA (according to Swiss-Prot)
  • Protein family: bacterial coaD family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1O6B (complex with ADP)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References