Difference between revisions of "YkvU"
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|style="background:#ABCDEF;" align="center"|'''Function''' || germination at high pressure | |style="background:#ABCDEF;" align="center"|'''Function''' || germination at high pressure | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13830 ykvU] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.551 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.551 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvT]]'', ''[[stoA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvT]]'', ''[[stoA]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13830 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:ykvU_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ykvU_context.gif]] | ||
Revision as of 12:40, 13 May 2013
- Description: spore cortex membrane protein, required for germination at high pressure
| Gene name | ykvU |
| Synonyms | |
| Essential | no |
| Product | spore cortex membrane protein |
| Function | germination at high pressure |
| Gene expression levels in SubtiExpress: ykvU | |
| MW, pI | 49 kDa, 9.551 |
| Gene length, protein length | 1335 bp, 445 aa |
| Immediate neighbours | ykvT, stoA |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
germination, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13830
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- forespore membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31686
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Allison Fay, Jonathan Dworkin
Bacillus subtilis homologs of MviN (MurJ), the putative Escherichia coli lipid II flippase, are not essential for growth.
J Bacteriol: 2009, 191(19);6020-8
[PubMed:19666716]
[WorldCat.org]
[DOI]
(I p)
Pradeep Vasudevan, Jessica McElligott, Christa Attkisson, Michael Betteken, David L Popham
Homologues of the Bacillus subtilis SpoVB protein are involved in cell wall metabolism.
J Bacteriol: 2009, 191(19);6012-9
[PubMed:19648239]
[WorldCat.org]
[DOI]
(I p)
Abram Aertsen, Isabelle Van Opstal, Suzy C Vanmuysen, Elke Y Wuytack, Chris W Michiels
Screening for Bacillus subtilis mutants deficient in pressure induced spore germination: identification of ykvU as a novel germination gene.
FEMS Microbiol Lett: 2005, 243(2);385-91
[PubMed:15686839]
[WorldCat.org]
[DOI]
(P p)
Daisuke Imamura, Kazuo Kobayashi, Junichi Sekiguchi, Naotake Ogasawara, Michio Takeuchi, Tsutomu Sato
spoIVH (ykvV), a requisite cortex formation gene, is expressed in both sporulating compartments of Bacillus subtilis.
J Bacteriol: 2004, 186(16);5450-9
[PubMed:15292147]
[WorldCat.org]
[DOI]
(P p)
Patrick Eichenberger, Shane T Jensen, Erin M Conlon, Christiaan van Ooij, Jessica Silvaggi, José Eduardo González-Pastor, Masaya Fujita, Sigal Ben-Yehuda, Patrick Stragier, Jun S Liu, Richard Losick
The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.
J Mol Biol: 2003, 327(5);945-72
[PubMed:12662922]
[WorldCat.org]
[DOI]
(P p)
