Difference between revisions of "CotZ"

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|style="background:#ABCDEF;" align="center"|'''Function''' || spore crust assembly
 
|style="background:#ABCDEF;" align="center"|'''Function''' || spore crust assembly
 
|-
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU11740 cotZ]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11740 cotZ]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CotZ CotZ]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CotZ CotZ]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cotO]]'', ''[[cotY]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cotO]]'', ''[[cotY]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13031&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11740 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:cotZ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cotZ_context.gif]]

Revision as of 12:33, 13 May 2013

  • Description: spore crust protein (insoluble fraction), necessary for the assembly of the spore crust, the outermost layer of the spore coat

Gene name cotZ
Synonyms
Essential no
Product spore crust protein (insoluble fraction)
Function spore crust assembly
Gene expression levels in SubtiExpress: cotZ
Interactions involving this protein in SubtInteract: CotZ
MW, pI 16 kDa, 5.102
Gene length, protein length 444 bp, 148 aa
Immediate neighbours cotO, cotY
Sequences Protein DNA Advanced_DNA
Genetic context
CotZ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CotZ expression.png





















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU11740

Phenotypes of a mutant

  • mis-assembly of the spore crust PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: outermost layer of the spore coat, more abundant at the mother cell-proximal pole of the forespore PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References