Difference between revisions of "YhaM"
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|style="background:#ABCDEF;" align="center"|'''Function''' || RNA degradation | |style="background:#ABCDEF;" align="center"|'''Function''' || RNA degradation | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU09930 yhaM] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 5.851 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 5.851 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sbcE]]'', ''[[yhaL]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sbcE]]'', ''[[yhaL]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU09930 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU09930 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU09930 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yhaM_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yhaM_context.gif]] | ||
Revision as of 12:27, 13 May 2013
- Description: RNase, 3'-> 5' exoribonuclease
| Gene name | yhaM |
| Synonyms | |
| Essential | no |
| Product | RNase YhaM |
| Function | RNA degradation |
| Gene expression levels in SubtiExpress: yhaM | |
| MW, pI | 35 kDa, 5.851 |
| Gene length, protein length | 942 bp, 314 aa |
| Immediate neighbours | sbcE, yhaL |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09930
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 3'-5' exoribonuclease
- Protein family: OB DNA-binding domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (Homogeneous) PubMed
Database entries
- Structure:
- UniProt: O07521
- KEGG entry: [3]
- E.C. number:
Additional information
- subject to Clp-dependent proteolysis upon glucose starvation PubMed
Expression and regulation
- Sigma factor:
- Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
David Bechhofer, Mount Sinai School, New York, USA Homepage
Your additional remarks
References
