Difference between revisions of "LipB"
Raphael2215 (talk | contribs) |
|||
| Line 13: | Line 13: | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || lipid degradation | |style="background:#ABCDEF;" align="center"|'''Function''' || lipid degradation | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU08350 lipB] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 9.677 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 22 kDa, 9.677 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[padR]]'', ''[[yfiQ]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[padR]]'', ''[[yfiQ]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08350 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:lipB_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:lipB_context.gif]] | ||
Revision as of 12:23, 13 May 2013
- Description: extracellular esterase, lipase
| Gene name | lipB |
| Synonyms | yfiP |
| Essential | no |
| Product | extracellular esterase, lipase |
| Function | lipid degradation |
| Gene expression levels in SubtiExpress: lipB | |
| MW, pI | 22 kDa, 9.677 |
| Gene length, protein length | 630 bp, 210 aa |
| Immediate neighbours | padR, yfiQ |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU08350
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): Lip
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q79F14
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: lipB (according to DBTBS)
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Thorsten Eggert, Ulf Brockmeier, Melloney J Dröge, Wim J Quax, Karl-Erich Jaeger
Extracellular lipases from Bacillus subtilis: regulation of gene expression and enzyme activity by amino acid supply and external pH.
FEMS Microbiol Lett: 2003, 225(2);319-24
[PubMed:12951259]
[WorldCat.org]
[DOI]
(P p)
T Eggert, G van Pouderoyen, B W Dijkstra, K E Jaeger
Lipolytic enzymes LipA and LipB from Bacillus subtilis differ in regulation of gene expression, biochemical properties, and three-dimensional structure.
FEBS Lett: 2001, 502(3);89-92
[PubMed:11583117]
[WorldCat.org]
[DOI]
(P p)
T Eggert, G Pencreac'h, I Douchet, R Verger, K E Jaeger
A novel extracellular esterase from Bacillus subtilis and its conversion to a monoacylglycerol hydrolase.
Eur J Biochem: 2000, 267(21);6459-69
[PubMed:11029590]
[WorldCat.org]
[DOI]
(P p)
G Kobayashi, J Toida, T Akamatsu, H Yamamoto, T Shida, J Sekiguchi
Accumulation of an artificial cell wall-binding lipase by Bacillus subtilis wprA and/or sigD mutants.
FEMS Microbiol Lett: 2000, 188(2);165-9
[PubMed:10913700]
[WorldCat.org]
[DOI]
(P p)
