Difference between revisions of "RpmE"
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || no {{PubMed|23002217}} |
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|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L31 | |style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L31 | ||
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[translation | + | {{SubtiWiki category|[[translation]]}} |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
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=== Database entries === | === Database entries === | ||
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=References= | =References= | ||
| − | + | '''Additional publications:''' {{PubMed|23002217}} | |
<pubmed>17163968,15049826, 19648245 19653700 20208344 </pubmed> | <pubmed>17163968,15049826, 19648245 19653700 20208344 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:51, 26 September 2012
- Description: ribosomal protein
| Gene name | rpmE |
| Synonyms | |
| Essential | no PubMed |
| Product | ribosomal protein L31 |
| Function | translation |
| Gene expression levels in SubtiExpress: rpmE | |
| Interactions involving this protein in SubtInteract: RpmE | |
| MW, pI | 7 kDa, 9.157 |
| Gene length, protein length | 198 bp, 66 aa |
| Immediate neighbours | tdk, rho |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37070
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: Type A subfamily (according to Swiss-Prot)
- Paralogous protein(s): YtiA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: Zn(2+) PubMed
Database entries
- Structure:
- UniProt: Q03223
- KEGG entry: [3]
- E.C. number:
Additional information
Under conditions of zinc starvation, RpmE is replaced by its paralog YtiA, that does not require zinc PubMed
Expression and regulation
- Operon: rpmE PubMed
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
