Difference between revisions of "CstA"

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* '''Operon:'''  
 
* '''Operon:'''  
 +
** [[cstA]]-[[ysfE]] {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cstA_2936382_2938178_-1 cstA] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cstA_2936382_2938178_-1 cstA] {{PubMed|22383849}}
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* '''Sigma factor:'''  
 
* '''Sigma factor:'''  
  
* '''Regulation:''' repressed by glucose (3.4-fold) ([[CcpA]]) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] 
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* '''Regulation:''' repressed by glucose (3.4-fold) ([[CcpA]]) {{PubMed|12850135,22900538}}
  
* '''Regulatory mechanism:''' [[CcpA]]: transcription repression  
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* '''Regulatory mechanism:'''  
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** [[CcpA]]: transcription repression {{PubMed|22900538}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
<pubmed>12850135, 19682248 </pubmed>
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<pubmed>12850135, 19682248 22900538 22383849</pubmed>
 
==The ''E. coli'' homolog==
 
==The ''E. coli'' homolog==
 
<pubmed>1848300</pubmed>
 
<pubmed>1848300</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:00, 21 August 2012

  • Description: putative peptide transporter, carbon starvation-induced protein

Gene name cstA
Synonyms
Essential no
Product putative peptide transporter, carbon starvation-induced protein
Function uptake of peptides
Gene expression levels in SubtiExpress: cstA
MW, pI 64 kDa, 8.658
Gene length, protein length 1794 bp, 598 aa
Immediate neighbours ysfE, abfA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CstA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
500px















Categories containing this gene/protein

transporters/ other, Utilization of nitrogen sources other than amino acids

This gene is a member of the following regulons

CcpA regulon

The gene

Basic information

  • Locus tag: BSU28710

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

the E.coli homolog: cstA

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: cstA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: repressed by glucose (3.4-fold) (CcpA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

The E. coli homolog