Difference between revisions of "YwcC"
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
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* '''Operon:''' | * '''Operon:''' | ||
| + | ** ''[[ywcC]]-[[gtaC]]-[[galK]]-[[galT]]'' {{PubMed|22383849,22893383}} | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywcC_3922292_3922963_-1 ywcC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywcC_3922292_3922963_-1 ywcC] {{PubMed|22383849}} | ||
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=References= | =References= | ||
| − | <pubmed>18647168,, 19788541 </pubmed> | + | <pubmed>18647168,22383849,22893383, 19788541 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 12:56, 16 August 2012
- Description: transcription repressor (TetR family), controls slrA expression
| Gene name | ywcC |
| Synonyms | ipa-33d |
| Essential | no |
| Product | transcription repressor (TetR family) |
| Function | control of SlrA expression |
| Gene expression levels in SubtiExpress: ywcC | |
| Regulation of this protein in SubtiPathways: Biofilm | |
| MW, pI | 25 kDa, 8.466 |
| Gene length, protein length | 669 bp, 223 aa |
| Immediate neighbours | gtaC, slrA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
transcription factors and their control, biofilm formation
This gene is a member of the following regulons
The YwcC regulon:
The gene
Basic information
- Locus tag: BSU38220
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P39601
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
